1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g009450.3.1

Solyc12g009450.3.1


Description : Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum (sp|q6l400|r1b16_solde : 354.0)


Gene families : OG0002721 (Archaeplastida) Phylogenetic Tree(s): OG0002721_tree ,
OG_05_0001818 (LandPlants) Phylogenetic Tree(s): OG_05_0001818_tree ,
OG_06_0000911 (SeedPlants) Phylogenetic Tree(s): OG_06_0000911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009450.3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Solyc04g011960.2.1 No alias Putative late blight resistance protein homolog R1A-6... 0.04 Archaeplastida
Solyc04g011980.1.1 No alias Putative late blight resistance protein homolog R1A-6... 0.04 Archaeplastida
Solyc04g015220.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g008070.4.1 No alias Putative late blight resistance protein homolog R1B-16... 0.1 Archaeplastida
Solyc06g062440.4.1 No alias Putative late blight resistance protein homolog R1A-6... 0.03 Archaeplastida
Solyc07g009180.1.1 No alias Putative late blight resistance protein homolog R1A-6... 0.03 Archaeplastida
Solyc07g049700.1.1 No alias Putative late blight resistance protein homolog R1A-6... 0.05 Archaeplastida
Solyc08g074250.3.1 No alias Putative late blight resistance protein homolog R1A-6... 0.05 Archaeplastida
Solyc10g051050.3.1 No alias Putative late blight resistance protein homolog R1B-12... 0.03 Archaeplastida
Solyc11g006630.1.1 No alias Putative late blight resistance protein homolog R1B-12... 0.05 Archaeplastida
Solyc12g006040.3.1 No alias Putative late blight resistance protein homolog R1A-6... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 218 459
No external refs found!