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  5. Solyc12g009490.3.1

Solyc12g009490.3.1


Description : transcription factor (ERF). SHN-type cutin and suberin biosynthesis transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0003909 (SeedPlants) Phylogenetic Tree(s): OG_06_0003909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009490.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00112550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G28360 ATERF12, ERF12 ERF domain protein 12 0.07 Archaeplastida
AT4G11140 CRF1 cytokinin response factor 1 0.03 Archaeplastida
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01027770001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os02g43820.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os03g09170.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
MA_24801g0010 No alias transcription factor (ERF) 0.08 Archaeplastida
MA_411387g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_47696g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_83118g0010 No alias transcription factor (DREB) 0.07 Archaeplastida
MA_924346g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
Mp6g08690.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Pp3c26_14710V3.1 No alias ethylene responsive element binding factor 1 0.01 Archaeplastida
Smo415574 No alias No description available 0.02 Archaeplastida
Solyc02g090790.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g066660.1.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e007352_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.05 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e022016_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e030090_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 53
No external refs found!