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  5. Solyc12g009960.2.1

Solyc12g009960.2.1


Description : component eIF-iso4G of eIF-iso4F unwinding complex


Gene families : OG0000590 (Archaeplastida) Phylogenetic Tree(s): OG0000590_tree ,
OG_05_0001492 (LandPlants) Phylogenetic Tree(s): OG_05_0001492_tree ,
OG_06_0001583 (SeedPlants) Phylogenetic Tree(s): OG_06_0001583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009960.2.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.101 No alias Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.02 Archaeplastida
GSVIVT01023638001 No alias Protein biosynthesis.translation initiation.mRNA... 0.04 Archaeplastida
Gb_34673 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.02 Archaeplastida
Mp7g16900.1 No alias component eIF4G of eIF4F mRNA unwinding complex 0.03 Archaeplastida
Pp3c14_20220V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.03 Archaeplastida
Pp3c14_20340V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.02 Archaeplastida
Pp3c17_18440V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.02 Archaeplastida
Pp3c17_18640V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.02 Archaeplastida
Pp3c17_18740V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.03 Archaeplastida
Zm00001e035213_P001 No alias component eIF4G of eIF4F mRNA unwinding complex 0.02 Archaeplastida
Zm00001e041159_P002 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 608 719
IPR003890 MIF4G-like_typ-3 203 428
No external refs found!