Solyc12g011200.3.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g011200.3.1
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00067720	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00013p00160270	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00015p00228580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00023p00102530	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00045p00128140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00053p00216880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00077p00103880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00078p00123870	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
AMTR_s00088p00164440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.04	Archaeplastida
AT1G66560	ATWRKY64, WRKY64	WRKY DNA-binding protein 64	0.08	Archaeplastida
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.03	Archaeplastida
AT1G69310	ATWRKY57, WRKY57	WRKY DNA-binding protein 57	0.04	Archaeplastida
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.03	Archaeplastida
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.02	Archaeplastida
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.03	Archaeplastida
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.02	Archaeplastida
GSVIVT01008046001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01008553001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
GSVIVT01010525001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01014854001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01020060001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01021765001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01029688001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01030453001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01037686001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_02625	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_03346	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_05176	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_06156	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_08731	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_12538	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Gb_25547	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Gb_26413	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g40430.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g53260.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g74140.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os02g47060.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g20550.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g46060.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os04g50920.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g40080.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g49100.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g50700.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os09g30400.3	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os11g29870.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os12g32250.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_11492g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_124797g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_134559g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_175750g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_23415g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.06	Archaeplastida
MA_934202g0010	No alias	transcription factor (WRKY)	0.05	Archaeplastida
MA_9394894g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp3g17660.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Mp4g00200.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c11_1790V3.1	No alias	WRKY DNA-binding protein 48	0.02	Archaeplastida
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.01	Archaeplastida
Pp3c19_3000V3.1	No alias	WRKY DNA-binding protein 28	0.03	Archaeplastida
Pp3c3_15040V3.1	No alias	WRKY DNA-binding protein 57	0.03	Archaeplastida
Pp3c3_21440V3.1	No alias	WRKY family transcription factor	0.05	Archaeplastida
Pp3c7_24490V3.1	No alias	WRKY DNA-binding protein 57	0.02	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.01	Archaeplastida
Smo147026	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Smo77979	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Solyc02g072190.4.1	No alias	No annotation	0.07	Archaeplastida
Solyc03g113120.4.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Solyc04g078550.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc07g055280.4.1	No alias	transcription factor (WRKY)	0.09	Archaeplastida
Solyc09g014990.4.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
Solyc12g056745.1.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e005626_P001	No alias	No annotation	0.03	Archaeplastida
Zm00001e007023_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e010048_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e016343_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e017439_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e019908_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020229_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020417_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e021431_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e022296_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e029092_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e032189_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e034148_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e036514_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e039306_P003	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e040369_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	190	246

External Links

No external refs found!

Solyc12g011200.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation