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  5. AMTR_s00032p00240160

AMTR_s00032p00240160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.277

Description : Redox homeostasis.cytosol/mitochondrion/nucleus redox homeostasis.O-type thioredoxin


Gene families : OG0000190 (Archaeplastida) Phylogenetic Tree(s): OG0000190_tree ,
OG_05_0008949 (LandPlants) Phylogenetic Tree(s): OG_05_0008949_tree ,
OG_06_0008248 (SeedPlants) Phylogenetic Tree(s): OG_06_0008248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00240160
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT5G39950 TRXH2, TRX2,... thioredoxin 2 0.04 Archaeplastida
LOC_Os06g45510.1 No alias O-type thioredoxin 0.03 Archaeplastida
MA_9543055g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g17420.1 No alias O-type thioredoxin 0.02 Archaeplastida
Solyc02g068500.3.1 No alias O-type thioredoxin 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005674 transcription factor TFIIF complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0019478 D-amino acid catabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046416 D-amino acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 87 159
No external refs found!