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  5. Solyc12g013940.1.1

Solyc12g013940.1.1


Description : transcriptional co-repressor (LUG)


Gene families : OG0000691 (Archaeplastida) Phylogenetic Tree(s): OG0000691_tree ,
OG_05_0016588 (LandPlants) Phylogenetic Tree(s): OG_05_0016588_tree ,
OG_06_0016200 (SeedPlants) Phylogenetic Tree(s): OG_06_0016200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g013940.1.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
MA_704500g0010 No alias transcriptional co-repressor (LUG) 0.02 Archaeplastida
MA_950191g0010 No alias transcriptional co-repressor (LUG) 0.02 Archaeplastida
Solyc05g026480.2.1 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 207 242
IPR001680 WD40_repeat 287 321
IPR001680 WD40_repeat 162 198
No external refs found!