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  5. Solyc12g014170.2.1

Solyc12g014170.2.1


Description : transcriptional co-activator (BET/GTE)


Gene families : OG0000250 (Archaeplastida) Phylogenetic Tree(s): OG0000250_tree ,
OG_05_0000330 (LandPlants) Phylogenetic Tree(s): OG_05_0000330_tree ,
OG_06_0000655 (SeedPlants) Phylogenetic Tree(s): OG_06_0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g014170.2.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00136760 evm_27.TU.AmTr_v1... Transcription factor GTE4 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00046p00231370 evm_27.TU.AmTr_v1... Transcription factor GTE7 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G27260 GTE8 global transcription factor group E8 0.03 Archaeplastida
Cre01.g048900 No alias No description available 0.03 Archaeplastida
Cre08.g367300 No alias Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01008492001 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01021322001 No alias Transcription factor GTE9 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Gb_30202 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os02g15220.2 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
LOC_Os08g03360.1 No alias Transcription factor GTE9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429630g0020 No alias Transcription factor GTE10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435152g0020 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.07 Archaeplastida
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.06 Archaeplastida
Pp3c12_15340V3.1 No alias DNA-binding bromodomain-containing protein 0.02 Archaeplastida
Smo83947 No alias Transcription factor GTE9 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e014297_P001 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e016462_P001 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Zm00001e024513_P001 No alias transcriptional co-activator (BET/GTE) 0.1 Archaeplastida
Zm00001e024861_P001 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Zm00001e026041_P001 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e029260_P001 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001487 Bromodomain 367 447
IPR027353 NET_dom 554 615
No external refs found!