Solyc12g015640.2.1

Description : transcription factor (mTERF)

Gene families : OG0008769 (Archaeplastida) Phylogenetic Tree(s): OG0008769_tree ,
OG_05_0009193 (LandPlants) Phylogenetic Tree(s): OG_05_0009193_tree ,
OG_06_0011513 (SeedPlants) Phylogenetic Tree(s): OG_06_0011513_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g015640.2.1
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method
AT5G55580	No alias	Mitochondrial transcription termination factor family protein	0.08	Archaeplastida
GSVIVT01037780001	No alias	RNA biosynthesis.organelle...	0.03	Archaeplastida
LOC_Os07g39430.1	No alias	transcription factor (mTERF)	0.08	Archaeplastida
MA_161180g0010	No alias	transcription factor (mTERF)	0.04	Archaeplastida
Mp2g14110.1	No alias	transcription factor (mTERF)	0.02	Archaeplastida
Pp3c11_22990V3.1	No alias	Mitochondrial transcription termination factor family protein	0.04	Archaeplastida
Zm00001e010645_P002	No alias	transcription factor (mTERF)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003690	MTERF	176	249
IPR003690	MTERF	238	434

External Links

No external refs found!

Solyc12g015640.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation