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  5. Solyc12g017370.3.1

Solyc12g017370.3.1


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g017370.3.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AT1G14600 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.13 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.12 Archaeplastida
AT3G12730 No alias Homeodomain-like superfamily protein 0.11 Archaeplastida
AT4G04605 No alias No description available 0.03 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01009589001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01022645001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.11 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
Gb_05469 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Gb_13931 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Gb_17437 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Gb_17966 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_41007 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.08 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
LOC_Os04g56990.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os07g48596.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_201937g0020 No alias Myb-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_21538g0020 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c13_9170V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c3_14670V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c3_23200V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c4_23130V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c8_8720V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc06g051060.4.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e001526_P001 No alias G2-like GARP transcription factor 0.08 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.08 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e027318_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e031978_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.1 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 128 167
IPR001005 SANT/Myb 35 83
No external refs found!