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  5. Solyc12g019120.2.1

Solyc12g019120.2.1


Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 432.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 224.3)


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0001044 (LandPlants) Phylogenetic Tree(s): OG_05_0001044_tree ,
OG_06_0000479 (SeedPlants) Phylogenetic Tree(s): OG_06_0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g019120.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00198650 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00019p00031370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00096p00105250 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AT1G02460 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G05650 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT1G05660 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT1G10640 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G65570 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.04 Archaeplastida
AT2G43860 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G43870 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT2G43880 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT2G43890 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G59850 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT4G01890 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
GSVIVT01004007001 No alias Polygalacturonase OS=Prunus persica 0.03 Archaeplastida
GSVIVT01008061001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.03 Archaeplastida
GSVIVT01013800001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01017302001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017305001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028189001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031298001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032114001 No alias Polygalacturonase OS=Actinidia deliciosa 0.05 Archaeplastida
GSVIVT01032117001 No alias Cell wall.pectin.modification and... 0.05 Archaeplastida
GSVIVT01032447001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01033362001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01033364001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01038241001 No alias Polygalacturonase OS=Prunus persica 0.03 Archaeplastida
Gb_05788 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
Gb_12018 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 Archaeplastida
Gb_13004 No alias polygalacturonase (PGX1) 0.03 Archaeplastida
Gb_27331 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 Archaeplastida
Gb_33196 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
LOC_Os01g66710.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
LOC_Os03g59330.1 No alias polygalacturonase (QRT2) 0.04 Archaeplastida
LOC_Os05g20020.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g50260.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_101764g0010 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_13282g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.08 Archaeplastida
MA_427851g0010 No alias Polygalacturonase OS=Cryptomeria japonica... 0.04 Archaeplastida
MA_63122g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 Archaeplastida
MA_925858g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c23_3890V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Smo78038 No alias Cell wall.pectin.modification and... 0.04 Archaeplastida
Solyc04g015530.3.1 No alias polygalacturonase (QRT2) 0.04 Archaeplastida
Solyc12g019220.1.1 No alias Polygalacturonase OS=Prunus persica... 0.06 Archaeplastida
Zm00001e011814_P002 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 Archaeplastida
Zm00001e019002_P001 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Zm00001e027720_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e036989_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 58 382
No external refs found!