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  5. Solyc12g019480.3.1

Solyc12g019480.3.1


Description : group-I formin actin filament elongation factor


Gene families : OG0000460 (Archaeplastida) Phylogenetic Tree(s): OG0000460_tree ,
OG_05_0000315 (LandPlants) Phylogenetic Tree(s): OG_05_0000315_tree ,
OG_06_0000245 (SeedPlants) Phylogenetic Tree(s): OG_06_0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g019480.3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00097480 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
AT2G43800 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 Archaeplastida
AT3G07540 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 Archaeplastida
AT3G25500 AHF1, FH1, AFH1, ATFH1 formin homology 1 0.04 Archaeplastida
AT5G67470 FH6, ATFH6 formin homolog 6 0.03 Archaeplastida
GSVIVT01031126001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
Gb_11092 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Gb_33203 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
LOC_Os01g67240.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
LOC_Os03g10680.1 No alias Formin-like protein 8 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g01070.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
LOC_Os04g38810.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
LOC_Os09g34180.1 No alias group-I formin actin filament elongation factor 0.13 Archaeplastida
MA_10241233g0010 No alias Formin-like protein 11 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_809393g0010 No alias group-I formin actin filament elongation factor 0.04 Archaeplastida
Mp5g03400.1 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Pp3c22_15110V3.1 No alias formin homolog 6 0.02 Archaeplastida
Zm00001e004155_P001 No alias group-I formin actin filament elongation factor 0.05 Archaeplastida
Zm00001e010169_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e012597_P001 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Zm00001e013697_P001 No alias group-I formin actin filament elongation factor 0.04 Archaeplastida
Zm00001e018960_P001 No alias group-I formin actin filament elongation factor 0.07 Archaeplastida
Zm00001e034711_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e038766_P001 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR015425 FH2_Formin 438 833
No external refs found!