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Description : Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana (sp|q6icx4|ptbp3_arath : 334.0)
Gene families : OG0003139 (Archaeplastida) Phylogenetic Tree(s): OG0003139_tree ,
OG_05_0111223 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0089220 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc12g019750.3.1 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020610.130 | No alias | Polypyrimidine tract-binding protein homolog 3... | 0.01 | Archaeplastida | |
| Gb_16815 | No alias | Polypyrimidine tract-binding protein homolog 3... | 0.02 | Archaeplastida | |
| MA_16057g0010 | No alias | Polypyrimidine tract-binding protein homolog 3... | 0.03 | Archaeplastida | |
| Pp3c14_17110V3.1 | No alias | polypyrimidine tract-binding protein 3 | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 141 | 204 |
| No external refs found! |