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  5. Solyc12g032970.1.1

Solyc12g032970.1.1


Description : Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa belladonna (sp|q8s8x5|psab_atrbe : 134.0)


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0001235 (SeedPlants) Phylogenetic Tree(s): OG_06_0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g032970.1.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Solyc02g036320.2.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Zea... 0.04 Archaeplastida
Solyc09g015290.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Coffea... 0.17 Archaeplastida
Solyc12g033060.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.01 Archaeplastida
Solyc12g035730.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc12g035740.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa... 0.33 Archaeplastida
Solyc12g062610.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Citrus... 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 18 93
No external refs found!