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  5. Solyc12g033000.1.1

Solyc12g033000.1.1


Description : Photosystem I P700 chlorophyll a apoprotein A2 OS=Sorghum bicolor (sp|a1e9s3|psab_sorbi : 146.0)


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0012444 (SeedPlants) Phylogenetic Tree(s): OG_06_0012444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g033000.1.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
ATCG00340 PSAB Photosystem I, PsaA/PsaB protein 0.02 Archaeplastida
ATCG00350 PSAA Photosystem I, PsaA/PsaB protein 0.03 Archaeplastida
Gb_09026 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.09 Archaeplastida
Gb_19163 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.1 Archaeplastida
Gb_41658 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
LOC_Os01g57962.1 No alias apoprotein PsaB of PS-I complex 0.07 Archaeplastida
LOC_Os04g16760.1 No alias apoprotein PsaA of PS-I complex 0.03 Archaeplastida
LOC_Os05g01675.1 No alias apoprotein PsaA of PS-I complex 0.03 Archaeplastida
LOC_Os10g21248.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
LOC_Os10g21250.1 No alias apoprotein PsaA of PS-I complex 0.03 Archaeplastida
LOC_Os10g38229.1 No alias apoprotein PsaA of PS-I complex 0.05 Archaeplastida
LOC_Os10g38234.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Mp1g07160.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.03 Archaeplastida
Mp1g16220.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
Mp3g20630.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
Solyc00g500056.1.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Solyc00g500057.1.1 No alias apoprotein PsaA of PS-I complex 0.04 Archaeplastida
Solyc00g500138.1.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Solyc00g500208.1.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Solyc00g500209.1.1 No alias apoprotein PsaA of PS-I complex 0.04 Archaeplastida
Solyc02g020960.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g009940.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.04 Archaeplastida
Zm00001e003909_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.05 Archaeplastida
Zm00001e008601_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
Zm00001e042035_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042075_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.05 Archaeplastida
Zm00001e042076_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042100_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042101_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.05 Archaeplastida
Zm00001e042164_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042354_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.06 Archaeplastida
Zm00001e042404_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.05 Archaeplastida
Zm00001e042440_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 1 79
No external refs found!