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  5. Solyc12g033070.1.1

Solyc12g033070.1.1


Description : NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum lycopersicum (sp|q32516|nu5c_sollc : 238.0)


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0012444 (SeedPlants) Phylogenetic Tree(s): OG_06_0012444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g033070.1.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009295001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.01 Archaeplastida
GSVIVT01014968001 No alias No description available 0.02 Archaeplastida
GSVIVT01017483001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.01 Archaeplastida
GSVIVT01017484001 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR002128 NADH_UbQ_OxRdtase_chlpt_su5_C 145 214
IPR001750 ND/Mrp_mem 75 139
IPR001280 PSI_PsaA/B 1 79
No external refs found!