1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g036400.1.1

Solyc12g036400.1.1


Description : no description available(sp|q65xs5|bc10_orysj : 169.0)


Gene families : OG0000189 (Archaeplastida) Phylogenetic Tree(s): OG0000189_tree ,
OG_05_0000499 (LandPlants) Phylogenetic Tree(s): OG_05_0000499_tree ,
OG_06_0000285 (SeedPlants) Phylogenetic Tree(s): OG_06_0000285_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g036400.1.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00172530 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G10880 No alias Core-2/I-branching... 0.04 Archaeplastida
AT1G62305 No alias Core-2/I-branching... 0.01 Archaeplastida
AT2G19160 No alias Core-2/I-branching... 0.03 Archaeplastida
LOC_Os04g20420.1 No alias no description available(sp|q65xs5|bc10_orysj : 171.0) 0.03 Archaeplastida
LOC_Os04g51794.2 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.03 Archaeplastida
LOC_Os06g45110.1 No alias no description available(sp|q65xs5|bc10_orysj : 184.0) 0.02 Archaeplastida
LOC_Os08g12890.1 No alias no description available(sp|q65xs5|bc10_orysj : 172.0) 0.08 Archaeplastida
MA_11883g0010 No alias no description available(sp|q65xs5|bc10_orysj : 160.0) 0.02 Archaeplastida
MA_19551g0010 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.03 Archaeplastida
Mp8g13670.1 No alias no description available(sp|q65xs5|bc10_orysj : 104.0) 0.02 Archaeplastida
Pp3c10_22140V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Pp3c1_42810V3.1 No alias Core-2/I-branching... 0.03 Archaeplastida
Zm00001e005574_P001 No alias no description available(sp|q65xs5|bc10_orysj : 162.0) 0.02 Archaeplastida
Zm00001e007002_P001 No alias no description available(sp|q65xs5|bc10_orysj : 177.0) 0.03 Archaeplastida
Zm00001e026725_P003 No alias no description available(sp|q65xs5|bc10_orysj : 579.0) 0.04 Archaeplastida
Zm00001e029160_P001 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 Archaeplastida
Zm00001e030236_P001 No alias no description available(sp|q65xs5|bc10_orysj : 184.0) 0.02 Archaeplastida
Zm00001e040053_P001 No alias no description available(sp|q65xs5|bc10_orysj : 165.0) 0.08 Archaeplastida
Zm00001e041599_P001 No alias no description available(sp|q65xs5|bc10_orysj : 166.0) 0.03 Archaeplastida
Zm00001e042023_P001 No alias no description available(sp|q65xs5|bc10_orysj : 163.0) 0.08 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 144 372
No external refs found!