Solyc12g042010.1.1


Description : transcription factor (bHLH)


Gene families : OG0001291 (Archaeplastida) Phylogenetic Tree(s): OG0001291_tree ,
OG_05_0000813 (LandPlants) Phylogenetic Tree(s): OG_05_0000813_tree ,
OG_06_0001029 (SeedPlants) Phylogenetic Tree(s): OG_06_0001029_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042010.1.1
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00155460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT2G43060 IBH1 ILI1 binding bHLH 1 0.06 Archaeplastida
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
Gb_14677 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_14678 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g14110.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os04g56500.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
MA_10431669g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_136890g0010 No alias transcription factor (bHLH) 0.01 Archaeplastida
MA_29054g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_40267g0020 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_7709601g0010 No alias No annotation 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!