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  5. Solyc12g042280.3.1

Solyc12g042280.3.1


Description : anion transporter (NRT1/PTR)


Gene families : OG0000014 (Archaeplastida) Phylogenetic Tree(s): OG0000014_tree ,
OG_05_0111372 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0089375 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042280.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00165p00058610 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.02 Archaeplastida
Cpa|evm.model.tig00021037.32 No alias Solute transport.carrier-mediated transport.MFS... 0.01 Archaeplastida
GSVIVT01024796001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 Archaeplastida
GSVIVT01025795001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 Archaeplastida
Gb_24311 No alias anion transporter (NRT1/PTR) 0.04 Archaeplastida
LOC_Os03g13274.2 No alias anion transporter (NRT1/PTR) 0.03 Archaeplastida
MA_10436042g0010 No alias anion transporter (NRT1/PTR) 0.03 Archaeplastida
Mp1g21610.1 No alias anion transporter (NRT1/PTR) 0.03 Archaeplastida
Mp3g07390.1 No alias anion transporter (NRT1/PTR) 0.02 Archaeplastida
Smo103849 No alias Solute transport.carrier-mediated transport.MFS... 0.04 Archaeplastida
Smo78769 No alias Solute transport.carrier-mediated transport.MFS... 0.03 Archaeplastida
Zm00001e000322_P002 No alias anion transporter (NRT1/PTR) 0.03 Archaeplastida
Zm00001e023301_P001 No alias anion transporter (NRT1/PTR) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000109 POT_fam 178 360
IPR000109 POT_fam 9 91
No external refs found!