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  5. Solyc12g042580.2.1

Solyc12g042580.2.1


Description : Lamin-like protein OS=Arabidopsis thaliana (sp|q39131|laml_arath : 103.0)


Gene families : OG0000039 (Archaeplastida) Phylogenetic Tree(s): OG0000039_tree ,
OG_05_0002592 (LandPlants) Phylogenetic Tree(s): OG_05_0002592_tree ,
OG_06_0001867 (SeedPlants) Phylogenetic Tree(s): OG_06_0001867_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042580.2.1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00255320 evm_27.TU.AmTr_v1... Blue copper protein OS=Pisum sativum 0.03 Archaeplastida
AMTR_s00013p00238100 evm_27.TU.AmTr_v1... Uclacyanin 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00067p00118460 evm_27.TU.AmTr_v1... Chemocyanin OS=Lilium longiflorum 0.04 Archaeplastida
AT1G22480 No alias Cupredoxin superfamily protein 0.03 Archaeplastida
AT2G27035 ENODL20, AtENODL20 early nodulin-like protein 20 0.03 Archaeplastida
AT2G32300 UCC1 uclacyanin 1 0.04 Archaeplastida
AT2G44790 UCC2 uclacyanin 2 0.04 Archaeplastida
AT3G17675 No alias Cupredoxin superfamily protein 0.03 Archaeplastida
AT4G12880 AtENODL19, ENODL19 early nodulin-like protein 19 0.04 Archaeplastida
AT5G15350 ENODL17, AtENODL17 early nodulin-like protein 17 0.03 Archaeplastida
AT5G26330 No alias Cupredoxin superfamily protein 0.07 Archaeplastida
GSVIVT01003354001 No alias No description available 0.03 Archaeplastida
GSVIVT01009090001 No alias Blue copper protein OS=Pisum sativum 0.03 Archaeplastida
GSVIVT01011475001 No alias Lamin-like protein OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01013874001 No alias Blue copper protein OS=Pisum sativum 0.06 Archaeplastida
GSVIVT01015561001 No alias Umecyanin OS=Armoracia rusticana 0.04 Archaeplastida
GSVIVT01018292001 No alias Uclacyanin-3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01023000001 No alias Basic blue protein OS=Cucumis sativus 0.03 Archaeplastida
GSVIVT01023002001 No alias Basic blue protein OS=Cucumis sativus 0.03 Archaeplastida
Gb_10187 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_pea : 108.0) 0.04 Archaeplastida
LOC_Os01g57690.1 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g43660.1 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_pea : 101.0) 0.03 Archaeplastida
LOC_Os03g50160.1 No alias Chemocyanin OS=Lilium longiflorum (sp|p60496|babl_lillo : 139.0) 0.03 Archaeplastida
LOC_Os03g55120.1 No alias Lamin-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g57730.1 No alias Basic blue protein OS=Cucumis sativus... 0.03 Archaeplastida
LOC_Os03g57740.1 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 91.7) 0.03 Archaeplastida
LOC_Os03g59280.1 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 112.0) 0.03 Archaeplastida
LOC_Os04g34480.1 No alias Basic blue protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os06g15600.1 No alias Chemocyanin OS=Lilium longiflorum (sp|p60496|babl_lillo : 97.1) 0.03 Archaeplastida
LOC_Os07g01440.1 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os07g07170.1 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g29390.1 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_pea : 109.0) 0.05 Archaeplastida
LOC_Os11g24140.1 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_pea : 84.3) 0.04 Archaeplastida
MA_101571g0010 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_28937g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_497147g0010 No alias Uclacyanin-3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_64516g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_783585g0010 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_pea : 99.4) 0.04 Archaeplastida
Mp2g05330.1 No alias Stellacyanin OS=Toxicodendron vernicifluum... 0.03 Archaeplastida
Mp3g09420.1 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 80.1) 0.02 Archaeplastida
Mp3g10780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_20040V3.1 No alias Cupredoxin superfamily protein 0.03 Archaeplastida
Pp3c1_7880V3.1 No alias early nodulin-like protein 14 0.04 Archaeplastida
Pp3c25_13140V3.1 No alias early nodulin-like protein 1 0.02 Archaeplastida
Pp3c26_6400V3.1 No alias Cupredoxin superfamily protein 0.03 Archaeplastida
Pp3c3_25110V3.1 No alias Cupredoxin superfamily protein 0.02 Archaeplastida
Pp3c7_18880V3.1 No alias No annotation 0.03 Archaeplastida
Smo24493 No alias Uclacyanin 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo405136 No alias No description available 0.04 Archaeplastida
Smo422957 No alias No description available 0.02 Archaeplastida
Solyc03g117560.3.1 No alias Lamin-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g008420.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g052660.1.1 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e005425_P001 No alias Basic blue protein OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006088_P001 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 108.0) 0.07 Archaeplastida
Zm00001e007358_P001 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_Pea : 100.0) 0.05 Archaeplastida
Zm00001e007359_P001 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e011820_P001 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 110.0) 0.06 Archaeplastida
Zm00001e015302_P002 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e023837_P001 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_Pea : 109.0) 0.03 Archaeplastida
Zm00001e030822_P001 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_Pea : 124.0) 0.02 Archaeplastida
Zm00001e032681_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e033530_P001 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e035970_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e040984_P001 No alias Chemocyanin OS=Lilium longiflorum (sp|p60496|babl_lillo : 126.0) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 32 112
No external refs found!