Solyc12g044930.3.1


Description : F-box protein At2g02240 OS=Arabidopsis thaliana (sp|q3e6p4|fb95_arath : 200.0)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g044930.3.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.02 Archaeplastida
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.02 Archaeplastida
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.05 Archaeplastida
LOC_Os02g56820.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g05480.1 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10430103g0010 No alias F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g100000.3.1 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g006740.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e040260_P002 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e041427_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042255 ribosome assembly IEP Neighborhood
BP GO:0042256 mature ribosome assembly IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 97 261
No external refs found!