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  5. Solyc12g055810.1.1

Solyc12g055810.1.1


Description : AAA-ATPase At5g57480 OS=Arabidopsis thaliana (sp|q9fkm3|aatpk_arath : 692.0)


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0003580 (SeedPlants) Phylogenetic Tree(s): OG_06_0003580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g055810.1.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00019p00215810 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00019p00244830 evm_27.TU.AmTr_v1... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00036p00176790 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT3G28580 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT4G25835 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G17760 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
GSVIVT01010357001 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g19260.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g45450.1 No alias AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g02330.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g58790.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g09420.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g22700.1 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g24320.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g28460.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g28550.1 No alias AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10285593g0010 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10435468g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_216982g0010 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c12_21960V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Pp3c1_35560V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c21_200V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Pp3c8_710V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
Smo413949 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc10g007280.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e007733_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e011416_P001 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e027961_P001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e033043_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e035111_P001 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e038158_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 241 311
IPR025753 AAA_N_dom 26 118
No external refs found!