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  5. Solyc12g056190.2.1

Solyc12g056190.2.1


Description : no hits & (original description: none)


Gene families : OG0002610 (Archaeplastida) Phylogenetic Tree(s): OG0002610_tree ,
OG_05_0002412 (LandPlants) Phylogenetic Tree(s): OG_05_0002412_tree ,
OG_06_0001871 (SeedPlants) Phylogenetic Tree(s): OG_06_0001871_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056190.2.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT5G41470 No alias Nuclear transport factor 2 (NTF2) family protein 0.25 Archaeplastida
Gb_07056 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_22143 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_41142 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10292445g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_98504g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc08g081450.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006454_P001 No alias no hits & (original description: none) 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!