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  5. Solyc12g056570.1.1

Solyc12g056570.1.1


Description : UPF0496 protein At3g49070 OS=Arabidopsis thaliana (sp|q9smu4|u496n_arath : 115.0)


Gene families : OG0002512 (Archaeplastida) Phylogenetic Tree(s): OG0002512_tree ,
OG_05_0001655 (LandPlants) Phylogenetic Tree(s): OG_05_0001655_tree ,
OG_06_0000925 (SeedPlants) Phylogenetic Tree(s): OG_06_0000925_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056570.1.1
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AT1G20180 No alias Protein of unknown function (DUF677) 0.04 Archaeplastida
GSVIVT01009973001 No alias UPF0496 protein At1g20180 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00671 No alias UPF0496 protein At3g49070 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_12696 No alias UPF0496 protein At3g19330 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_12697 No alias UPF0496 protein At3g19330 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc04g071523.1.1 No alias UPF0496 protein At3g49070 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e000385_P002 No alias UPF0496 protein 3 OS=Oryza sativa subsp. indica... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR007749 DUF677 49 346
No external refs found!