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  4. Sequence
  5. Solyc12g057100.2.1

Solyc12g057100.2.1


Description : organic cation transporter (PUP)


Gene families : OG0000345 (Archaeplastida) Phylogenetic Tree(s): OG0000345_tree ,
OG_05_0000166 (LandPlants) Phylogenetic Tree(s): OG_05_0000166_tree ,
OG_06_0031964 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g057100.2.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00097090 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.04 Archaeplastida
AMTR_s00135p00104240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.02 Archaeplastida
AMTR_s02825p00003100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.04 Archaeplastida
AT1G28230 PUP1, ATPUP1 purine permease 1 0.05 Archaeplastida
AT2G33750 ATPUP2, PUP2 purine permease 2 0.04 Archaeplastida
AT4G18210 ATPUP10, PUP10 purine permease 10 0.04 Archaeplastida
GSVIVT01009073001 No alias Solute transport.carrier-mediated transport.DMT... 0.04 Archaeplastida
GSVIVT01018360001 No alias Solute transport.carrier-mediated transport.DMT... 0.05 Archaeplastida
Gb_26361 No alias organic cation transporter (PUP) 0.05 Archaeplastida
LOC_Os02g46380.1 No alias organic cation transporter (PUP) 0.02 Archaeplastida
LOC_Os09g29210.1 No alias organic cation transporter (PUP) 0.04 Archaeplastida
MA_10426553g0010 No alias organic cation transporter (PUP) 0.02 Archaeplastida
MA_12848g0010 No alias organic cation transporter (PUP) 0.04 Archaeplastida
Smo236291 No alias Solute transport.carrier-mediated transport.DMT... 0.04 Archaeplastida
Smo417455 No alias Solute transport.carrier-mediated transport.DMT... 0.04 Archaeplastida
Solyc06g035420.1.1 No alias organic cation transporter (PUP) 0.04 Archaeplastida
Solyc07g008440.3.1 No alias organic cation transporter (PUP) 0.05 Archaeplastida
Solyc12g087870.2.1 No alias organic cation transporter (PUP) 0.05 Archaeplastida
Zm00001e009987_P001 No alias organic cation transporter (PUP) 0.05 Archaeplastida
Zm00001e023264_P001 No alias organic cation transporter (PUP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!