Solyc12g062720.3.1

Description : Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana (sp|q9ca54|pp122_arath : 776.0)

Gene families : OG0014065 (Archaeplastida) Phylogenetic Tree(s): OG0014065_tree ,
OG_05_0013993 (LandPlants) Phylogenetic Tree(s): OG_05_0013993_tree ,
OG_06_0013910 (SeedPlants) Phylogenetic Tree(s): OG_06_0013910_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g062720.3.1
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc07g021450.3.1	No alias	Pentatricopeptide repeat-containing protein At1g74630...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
CC	GO:0009579	thylakoid	IEP	Neighborhood
BP	GO:0015979	photosynthesis	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	495	619
IPR002885	Pentatricopeptide_repeat	335	381
IPR002885	Pentatricopeptide_repeat	310	333
IPR002885	Pentatricopeptide_repeat	410	429
IPR002885	Pentatricopeptide_repeat	173	199
IPR002885	Pentatricopeptide_repeat	205	232
IPR002885	Pentatricopeptide_repeat	235	261

External Links

No external refs found!