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  5. Solyc12g088050.2.1

Solyc12g088050.2.1


Description : no hits & (original description: none)


Gene families : OG0000794 (Archaeplastida) Phylogenetic Tree(s): OG0000794_tree ,
OG_05_0000615 (LandPlants) Phylogenetic Tree(s): OG_05_0000615_tree ,
OG_06_0000503 (SeedPlants) Phylogenetic Tree(s): OG_06_0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088050.2.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
LOC_Os08g44020.2 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10427585g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429122g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c4_23770V3.1 No alias Rhamnogalacturonate lyase family protein 0.03 Archaeplastida
Solyc11g011300.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 358 420
IPR029411 RG-lyase_III 435 622
IPR010325 Rhamnogal_lyase 11 203
No external refs found!