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  5. Solyc12g088140.2.1

Solyc12g088140.2.1


Description : no hits & (original description: none)


Gene families : OG0005185 (Archaeplastida) Phylogenetic Tree(s): OG0005185_tree ,
OG_05_0003554 (LandPlants) Phylogenetic Tree(s): OG_05_0003554_tree ,
OG_06_0005347 (SeedPlants) Phylogenetic Tree(s): OG_06_0005347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088140.2.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00184p00038670 evm_27.TU.AmTr_v1... Uncharacterized protein At5g65660 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01003715001 No alias Uncharacterized protein At5g65660 OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_886565g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc03g043740.4.1 No alias Uncharacterized protein At5g65660 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e011642_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!