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  5. Solyc12g088240.2.1

Solyc12g088240.2.1


Description : 1,4-beta-glucan synthase (CSLC)


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000643 (LandPlants) Phylogenetic Tree(s): OG_05_0000643_tree ,
OG_06_0000676 (SeedPlants) Phylogenetic Tree(s): OG_06_0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088240.2.1

Target Alias Description ECC score Gene Family Method Actions
AT4G07960 ATCSLC12, CSLC12 Cellulose-synthase-like C12 0.02 Archaeplastida
AT4G31590 ATCSLC05,... Cellulose-synthase-like C5 0.03 Archaeplastida
GSVIVT01031405001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.04 Archaeplastida
GSVIVT01032523001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.04 Archaeplastida
GSVIVT01033168001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.05 Archaeplastida
GSVIVT01033767001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.06 Archaeplastida
Gb_05418 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
LOC_Os06g42020.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Pp3c14_12270V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Pp3c17_19630V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Pp3c17_19670V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Pp3c18_10540V3.1 No alias Cellulose-synthase-like C5 0.02 Archaeplastida
Pp3c27_7220V3.1 No alias Cellulose-synthase-like C5 0.04 Archaeplastida
Solyc04g077470.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.07 Archaeplastida
Solyc08g006310.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida
Solyc10g083670.3.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Solyc11g066820.2.1 No alias mannan synthase (CSLA) 0.05 Archaeplastida
Zm00001e025054_P003 No alias mannan synthase (CSLA) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!