- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (bHLH)
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0089447 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc12g088380.1.1 | |
| Cluster | HCCA: Cluster_126 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00250370 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| AT1G09530 | PIF3, POC1, PAP3 | phytochrome interacting factor 3 | 0.05 | Archaeplastida | |
| AT1G27740 | RSL4 | root hair defective 6-like 4 | 0.16 | Archaeplastida | |
| AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.04 | Archaeplastida | |
| AT2G14760 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT2G46970 | PIL1 | phytochrome interacting factor 3-like 1 | 0.05 | Archaeplastida | |
| AT3G21330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT3G50330 | HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT4G00120 | GT140, IND1, IND, EDA33 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| AT4G33880 | RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.06 | Archaeplastida | |
| AT5G09750 | HEC3 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT5G37800 | ATRSL1, RSL1 | RHD SIX-LIKE 1 | 0.05 | Archaeplastida | |
| AT5G43175 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| AT5G67060 | HEC1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| GSVIVT01028238001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | Archaeplastida | |
| Gb_30839 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os01g02110.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os01g51140.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os03g10770.1 | No alias | transcription factor (bHLH) | 0.12 | Archaeplastida | |
| LOC_Os05g46370.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os06g06900.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os06g47980.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os07g39940.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os08g01700.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os09g28210.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os11g41640.1 | No alias | transcription factor (bHLH) | 0.06 | Archaeplastida | |
| LOC_Os12g39850.1 | No alias | transcription factor (bHLH) | 0.12 | Archaeplastida | |
| MA_100071g0010 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
| MA_29441g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_306658g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_83500g0010 | No alias | transcription factor (bHLH) | 0.08 | Archaeplastida | |
| MA_88831g0010 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Mp3g17930.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Mp5g09710.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Pp3c10_19020V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Pp3c16_21590V3.1 | No alias | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.06 | Archaeplastida | |
| Pp3c17_15380V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_40040V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c25_13740V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| Smo404767 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Smo409967 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | Archaeplastida | |
| Smo413232 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.06 | Archaeplastida | |
| Smo418491 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Smo419388 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Solyc02g091440.2.1 | No alias | transcription factor (bHLH) | 0.11 | Archaeplastida | |
| Solyc03g044460.1.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Solyc09g005070.1.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e006917_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e015610_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e019392_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e020012_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e025656_P001 | No alias | transcription factor (bHLH) | 0.07 | Archaeplastida | |
| Zm00001e027758_P002 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e029147_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e032280_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e035422_P001 | No alias | transcription factor (bHLH) | 0.1 | Archaeplastida | |
| Zm00001e038765_P001 | No alias | transcription factor (bHLH) | 0.1 | Archaeplastida | |
| Zm00001e041668_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| CC | GO:0005618 | cell wall | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016289 | CoA hydrolase activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| CC | GO:0048046 | apoplast | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |