Solyc12g088390.1.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088390.1.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00073930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G27730 ZAT10, STZ salt tolerance zinc finger 0.05 Archaeplastida
AT2G28710 No alias C2H2-type zinc finger family protein 0.05 Archaeplastida
AT3G46080 No alias C2H2-type zinc finger family protein 0.04 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
AT5G43170 AZF3, ZF3 zinc-finger protein 3 0.03 Archaeplastida
AT5G56200 No alias C2H2 type zinc finger transcription factor family 0.03 Archaeplastida
GSVIVT01037851001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_10420 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_16419 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Gb_33209 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Gb_40148 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g62190.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g55540.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g60540.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g60560.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os05g02390.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os08g20580.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_10361509g0020 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_119483g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_19127g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_584554g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc01g107170.2.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc05g054650.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e001253_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e003057_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e005777_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e006181_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e006184_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e011756_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e028782_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e030114_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e035423_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e038072_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!