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  5. Solyc12g088670.2.1

Solyc12g088670.2.1


Description : Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum (sp|p20721|cyspl_sollc : 644.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 356.0)


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0000929 (SeedPlants) Phylogenetic Tree(s): OG_06_0000929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088670.2.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00165270 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00051p00208220 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 Archaeplastida
AMTR_s01332p00008900 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AT1G06260 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.03 Archaeplastida
AT2G27420 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT5G50260 No alias Cysteine proteinases superfamily protein 0.04 Archaeplastida
Cre05.g247851 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01020696001 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 Archaeplastida
Gb_12857 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_17130 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
Gb_31935 No alias Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Gb_31936 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g67980.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os01g73980.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 Archaeplastida
LOC_Os11g14900.4 No alias protease (Papain) 0.03 Archaeplastida
MA_103463g0010 No alias Vignain OS=Vigna mungo (sp|p12412|cysep_vigmu : 408.0) &... 0.03 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp8g12950.1 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c19_6730V3.1 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
Solyc04g078540.4.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006743_P002 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e012028_P001 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.04 Archaeplastida
Zm00001e028260_P001 No alias Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 Archaeplastida
Zm00001e030283_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e030284_P002 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e041788_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 49 106
IPR000668 Peptidase_C1A_C 138 352
IPR000118 Granulin 387 433
No external refs found!