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  5. Solyc12g089170.3.1

Solyc12g089170.3.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000767 (LandPlants) Phylogenetic Tree(s): OG_05_0000767_tree ,
OG_06_0000381 (SeedPlants) Phylogenetic Tree(s): OG_06_0000381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g089170.3.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.04 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01009723001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01013684001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013871001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014754001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g64360.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os03g62100.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
MA_10432538g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_6326342g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Pp3c9_19080V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Smo133546 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g082390.1.1 No alias transcription factor (MYB-related) 0.12 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Solyc04g150172.1.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc09g007580.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e027520_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028675_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e036372_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 4 51
No external refs found!