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  5. Solyc12g089310.2.1

Solyc12g089310.2.1


Description : component beta-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree ,
OG_06_0000065 (SeedPlants) Phylogenetic Tree(s): OG_06_0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g089310.2.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00190040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Gb_29799 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os03g56810.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 Archaeplastida
MA_72744g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Pp3c2_26580V3.1 No alias tubulin beta chain 2 0.02 Archaeplastida
Pp3c8_2420V3.1 No alias tubulin beta chain 2 0.02 Archaeplastida
Zm00001e039740_P001 No alias Tubulin beta-7 chain OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Zm00001e042329_P001 No alias Tubulin beta-7 chain OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004529 exodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Neighborhood
MF GO:0008409 5'-3' exonuclease activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Neighborhood
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Neighborhood
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 265 386
IPR003008 Tubulin_FtsZ_GTPase 3 215
No external refs found!