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  5. Solyc12g096110.3.1

Solyc12g096110.3.1


Description : Protein BREVIS RADIX OS=Arabidopsis thaliana (sp|q17ti5|brx_arath : 287.0)


Gene families : OG0001106 (Archaeplastida) Phylogenetic Tree(s): OG0001106_tree ,
OG_05_0000672 (LandPlants) Phylogenetic Tree(s): OG_05_0000672_tree ,
OG_06_0000629 (SeedPlants) Phylogenetic Tree(s): OG_06_0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g096110.3.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00206190 evm_27.TU.AmTr_v1... Protein Brevis radix-like 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G31880 BRX, NLM9 DZC (Disease resistance/zinc finger/chromosome... 0.03 Archaeplastida
GSVIVT01015117001 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.1 Archaeplastida
GSVIVT01015118001 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.08 Archaeplastida
LOC_Os03g63650.1 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc07g041230.3.1 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006397_P001 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e007054_P001 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e015552_P003 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.01 Archaeplastida
Zm00001e041570_P002 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR027988 BRX_N 24 52
IPR013591 Brevis_radix_dom 255 310
IPR013591 Brevis_radix_dom 125 179
No external refs found!