Solyc12g096230.2.1

Description : Alkylated DNA repair protein ALKBH8 homolog OS=Arabidopsis thaliana (sp|q8rwy1|alkb8_arath : 422.0)

Gene families : OG0002487 (Archaeplastida) Phylogenetic Tree(s): OG0002487_tree ,
OG_05_0009309 (LandPlants) Phylogenetic Tree(s): OG_05_0009309_tree ,
OG_06_0010646 (SeedPlants) Phylogenetic Tree(s): OG_06_0010646_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g096230.2.1
Cluster	HCCA: Cluster_233

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e015860_P001	No alias	component TRM9 of TRM9-TRM112 tRNA...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0009982	pseudouridine synthase activity	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
MF	GO:0016866	intramolecular transferase activity	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR027450	AlkB-like	120	322

External Links

No external refs found!