Solyc12g096890.1.1


Description : F-box protein PP2-B10 OS=Arabidopsis thaliana (sp|q9zvq6|p2b10_arath : 132.0)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g096890.1.1
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.05 Archaeplastida
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.05 Archaeplastida
AT2G02320 AtPP2-B7, PP2-B7 phloem protein 2-B7 0.04 Archaeplastida
GSVIVT01003897001 No alias F-box protein At2g02240 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01003898001 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01003902001 No alias No description available 0.04 Archaeplastida
GSVIVT01026408001 No alias No description available 0.05 Archaeplastida
LOC_Os02g56800.1 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g56810.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g56820.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g03740.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g100010.3.1 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e041427_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 1 159
No external refs found!