Solyc12g097020.2.1

Description : effector receptor (NLR)

Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000726 (LandPlants) Phylogenetic Tree(s): OG_05_0000726_tree ,
OG_06_0002481 (SeedPlants) Phylogenetic Tree(s): OG_06_0002481_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g097020.2.1
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AT5G18350	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Archaeplastida
AT5G38350	No alias	Disease resistance protein (NBS-LRR class) family	0.02	Archaeplastida
AT5G41540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.01	Archaeplastida
AT5G49140	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G51630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G58120	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.01	Archaeplastida
GSVIVT01020123001	No alias	External stimuli response.biotic stress.pathogen...	0.02	Archaeplastida
GSVIVT01023025001	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.06	Archaeplastida
Solyc07g052780.3.1	No alias	effector receptor (NLR)	0.08	Archaeplastida
Solyc07g052800.3.1	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.25	Archaeplastida
Solyc12g097000.2.1	No alias	effector receptor (NLR)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	11	178
IPR002182	NB-ARC	193	323

External Links

No external refs found!