Solyc12g098210.3.1

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g098210.3.1
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00242220	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
AMTR_s00040p00185210	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00122p00120860	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT2G26910	PDR4, ATPDR4	pleiotropic drug resistance 4	0.05	Archaeplastida
AT2G36380	PDR6, ATPDR6	pleiotropic drug resistance 6	0.04	Archaeplastida
AT2G37280	ATPDR5, PDR5	pleiotropic drug resistance 5	0.02	Archaeplastida
AT3G53480	PIS1, ABCG37,...	pleiotropic drug resistance 9	0.03	Archaeplastida
AT4G15233	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
AT4G15236	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.04	Archaeplastida
Cpa\|evm.model.tig00000057.108	No alias	ABC transporter G family member 35 OS=Arabidopsis thaliana	0.04	Archaeplastida
Cpa\|evm.model.tig00020902.2	No alias	ABC transporter G family member 29 OS=Arabidopsis thaliana	0.01	Archaeplastida
GSVIVT01016993001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01016998001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01016999001	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
GSVIVT01017185001	No alias	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
GSVIVT01017187001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017196001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01017198001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01031378001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01035715001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01035785001	No alias	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
GSVIVT01035786001	No alias	Solute transport.primary active transport.ABC...	0.08	Archaeplastida
Gb_01859	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_05443	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Gb_33043	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Gb_34309	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Gb_34645	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_34646	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.02	Archaeplastida
Gb_37006	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_37007	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Gb_41755	No alias	subfamily ABCG transporter	0.05	Archaeplastida
LOC_Os01g42410.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os01g52560.1	No alias	subfamily ABCG transporter	0.06	Archaeplastida
LOC_Os02g11760.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os02g32690.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os06g36090.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os07g33780.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os09g16449.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os11g37700.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_10427561g0010	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_10435419g0010	No alias	ABC transporter G family member 35 OS=Oryza sativa...	0.03	Archaeplastida
MA_117094g0010	No alias	no description available(sp\|h6ws94\|pdr1_pethy : 134.0)	0.05	Archaeplastida
MA_12781g0010	No alias	ABC transporter G family member 31 OS=Oryza sativa...	0.05	Archaeplastida
MA_160238g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_84624g0010	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Mp1g24380.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp1g25350.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Mp2g07030.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp2g21800.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp4g06670.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Pp3c14_11830V3.1	No alias	pleiotropic drug resistance 7	0.03	Archaeplastida
Pp3c16_13830V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c18_21520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c19_18700V3.1	No alias	pleiotropic drug resistance 7	0.02	Archaeplastida
Pp3c5_23360V3.1	No alias	pleiotropic drug resistance 7	0.02	Archaeplastida
Smo101338	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo115821	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Smo122902	No alias	ABC transporter G family member 34 OS=Arabidopsis thaliana	0.04	Archaeplastida
Smo133564	No alias	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
Smo412699	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo412710	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo417263	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo417266	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo424638	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo424639	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo441717	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo441720	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo96758	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc08g067610.3.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g100190.2.1	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Zm00001e006460_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e016714_P002	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e026148_P001	No alias	subfamily ABCG transporter	0.07	Archaeplastida
Zm00001e027850_P001	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Zm00001e030669_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e033859_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e037233_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	856	1008
IPR003439	ABC_transporter-like	175	357
IPR013525	ABC_2_trans	511	723
IPR013525	ABC_2_trans	1153	1367
IPR013581	PDR_assoc	728	791
IPR029481	ABC_trans_N	90	150

External Links

No external refs found!

Solyc12g098210.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation