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  5. Solyc12g098620.2.1

Solyc12g098620.2.1


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0000169 (SeedPlants) Phylogenetic Tree(s): OG_06_0000169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g098620.2.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
AMTR_s00022p00228970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00025p00087300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00079p00137860 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
AT1G18400 BEE1 BR enhanced expression 1 0.05 Archaeplastida
AT1G25330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G35460 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.03 Archaeplastida
AT1G73830 BEE3 BR enhanced expression 3 0.03 Archaeplastida
AT2G18300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT2G42280 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G34530 CIB1 cryptochrome-interacting basic-helix-loop-helix 1 0.05 Archaeplastida
AT5G48560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G58010 LRL3 LJRHL1-like 3 0.09 Archaeplastida
GSVIVT01008628001 No alias External stimuli response.light.UV-A/blue... 0.05 Archaeplastida
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01032055001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01033356001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_05320 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_12493 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Gb_33185 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Gb_36369 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Gb_39758 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
LOC_Os01g68700.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
LOC_Os02g47660.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
LOC_Os04g41229.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g08500.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
LOC_Os06g41060.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g33580.2 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
LOC_Os11g25560.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
MA_10344244g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10435000g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_105921g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_120179g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_13676g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.06 Archaeplastida
MA_158850g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_42080g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_52085g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
MA_939320g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mpzg01410.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c14_24070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c16_7710V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c17_17000V3.1 No alias LJRHL1-like 1 0.03 Archaeplastida
Pp3c20_590V3.1 No alias cryptochrome-interacting basic-helix-loop-helix 5 0.03 Archaeplastida
Pp3c21_14114V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_9520V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c9_3300V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo402301 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Smo425336 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
Smo444782 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc03g113560.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc09g065820.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc09g098110.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc12g036470.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e010060_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e011084_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.07 Archaeplastida
Zm00001e015045_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e021418_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e022005_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e034446_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Zm00001e034605_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.01 Archaeplastida
Zm00001e036318_P001 No alias transcription factor (bHLH) 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 229 276
No external refs found!