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  5. Solyc12g099010.3.1

Solyc12g099010.3.1


Description : Protein GFS12 OS=Arabidopsis thaliana (sp|f4jy12|gfs12_arath : 860.0)


Gene families : OG0007342 (Archaeplastida) Phylogenetic Tree(s): OG0007342_tree ,
OG_05_0006990 (LandPlants) Phylogenetic Tree(s): OG_05_0006990_tree ,
OG_06_0008919 (SeedPlants) Phylogenetic Tree(s): OG_06_0008919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g099010.3.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AT5G18525 No alias protein serine/threonine kinases;protein tyrosine... 0.03 Archaeplastida
Gb_38045 No alias Protein GFS12 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0035596 methylthiotransferase activity IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 738 774
IPR001680 WD40_repeat 565 595
No external refs found!