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  5. Solyc12g099120.3.1

Solyc12g099120.3.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g099120.3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.03 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 Archaeplastida
GSVIVT01024036001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036552001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_09986 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g20280.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c16_10020V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e023277_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 20 67
IPR001005 SANT/Myb 74 116
No external refs found!