1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g099700.3.1

Solyc12g099700.3.1


Description : Lipoyl synthase, chloroplastic OS=Ricinus communis (sp|b9rx57|lisc_ricco : 583.0) & Enzyme classification.EC_2 transferases.EC_2.8 transferase transferring sulfur-containing group(50.2.8 : 470.6)


Gene families : OG0001760 (Archaeplastida) Phylogenetic Tree(s): OG0001760_tree ,
OG_05_0006296 (LandPlants) Phylogenetic Tree(s): OG_05_0006296_tree ,
OG_06_0006728 (SeedPlants) Phylogenetic Tree(s): OG_06_0006728_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g099700.3.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AT5G08415 No alias Radical SAM superfamily protein 0.06 Archaeplastida
Cpa|evm.model.tig00000865.57 No alias Enzyme classification.EC_2 transferases.EC_2.8... 0.02 Archaeplastida
Cre02.g114400 No alias Lipoyl synthase, chloroplastic OS=Chlamydomonas reinhardtii 0.05 Archaeplastida
Cre08.g359700 No alias Coenzyme metabolism.lipoic acid synthesis.lipoate synthase 0.02 Archaeplastida
Pp3c22_7200V3.1 No alias Radical SAM superfamily protein 0.02 Archaeplastida
Zm00001e019700_P001 No alias Lipoyl synthase 2, chloroplastic OS=Zea mays... 0.03 Archaeplastida
Zm00001e028978_P001 No alias Lipoyl synthase 1, chloroplastic OS=Zea mays... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR031691 LIAS_N 132 169
IPR007197 rSAM 193 353
No external refs found!