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  5. Solyc12g099970.2.1

Solyc12g099970.2.1


Description : regulatory subunit beta of SNF1-related SnRK1 kinase complex. regulatory subunit beta of SnRK1 kinase complex


Gene families : OG0000952 (Archaeplastida) Phylogenetic Tree(s): OG0000952_tree ,
OG_05_0001859 (LandPlants) Phylogenetic Tree(s): OG_05_0001859_tree ,
OG_06_0002296 (SeedPlants) Phylogenetic Tree(s): OG_06_0002296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g099970.2.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT4G16360 No alias 5'-AMP-activated protein kinase beta-2 subunit protein 0.03 Archaeplastida
AT5G21170 AKINBETA1 5'-AMP-activated protein kinase beta-2 subunit protein 0.02 Archaeplastida
GSVIVT01037416001 No alias Multi-process regulation.SnRK1 metabolic regulator... 0.02 Archaeplastida
Gb_07871 No alias regulatory subunit beta of SNF1-related SnRK1 kinase... 0.03 Archaeplastida
LOC_Os05g41220.1 No alias regulatory subunit beta of SNF1-related SnRK1 kinase... 0.05 Archaeplastida
Solyc07g045460.3.1 No alias regulatory subunit beta of SNF1-related SnRK1 kinase... 0.05 Archaeplastida
Solyc11g012710.2.1 No alias regulatory subunit beta of SNF1-related SnRK1 kinase... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 104 185
IPR006828 ASC_dom 218 286
No external refs found!