1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g100020.1.1

Solyc12g100020.1.1


Description : Receptor-like protein Cf-9 OS=Solanum pimpinellifolium (sp|q40235|cf9_solpi : 533.0)


Gene families : OG0001756 (Archaeplastida) Phylogenetic Tree(s): OG0001756_tree ,
OG_05_0001185 (LandPlants) Phylogenetic Tree(s): OG_05_0001185_tree ,
OG_06_0000788 (SeedPlants) Phylogenetic Tree(s): OG_06_0000788_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g100020.1.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020334001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.03 Archaeplastida
GSVIVT01036792001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.03 Archaeplastida
Solyc01g006550.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.06 Archaeplastida
Solyc03g082780.3.1 No alias Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 284 343
IPR001611 Leu-rich_rpt 492 549
IPR013210 LRR_N_plant-typ 31 75
No external refs found!