Solyc12g100190.2.1

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g100190.2.1
Cluster	HCCA: Cluster_261

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00242220	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00056p00117010	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT1G15210	ATPDR7, PDR7	pleiotropic drug resistance 7	0.04	Archaeplastida
AT2G26910	PDR4, ATPDR4	pleiotropic drug resistance 4	0.05	Archaeplastida
AT3G30842	ATPDR10, PDR10	pleiotropic drug resistance 10	0.05	Archaeplastida
AT4G15233	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
AT4G15236	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.05	Archaeplastida
GSVIVT01017185001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017187001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01017198001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01017201001	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
GSVIVT01028216001	No alias	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum	0.03	Archaeplastida
GSVIVT01035785001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01035786001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01036184001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_05443	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Gb_15493	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Gb_34309	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_34645	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Gb_37007	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os01g08260.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os01g42410.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os01g52560.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os02g11760.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os02g21340.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os07g33780.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os09g16449.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_10426781g0010	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_117094g0010	No alias	no description available(sp\|h6ws94\|pdr1_pethy : 134.0)	0.04	Archaeplastida
MA_124091g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_12781g0010	No alias	ABC transporter G family member 31 OS=Oryza sativa...	0.04	Archaeplastida
MA_12965g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_135152g0010	No alias	subfamily ABCG transporter	0.06	Archaeplastida
MA_160238g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_42871g0020	No alias	ABC transporter G family member 40 OS=Arabidopsis...	0.03	Archaeplastida
MA_630122g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_84624g0010	No alias	subfamily ABCG transporter	0.06	Archaeplastida
MA_911577g0010	No alias	ABC transporter G family member 36 OS=Arabidopsis...	0.02	Archaeplastida
MA_949447g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp2g14210.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Mp2g21800.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Mp8g13070.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Pp3c5_3240V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Smo101338	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo115821	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo118688	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo424638	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo424639	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo429390	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo96758	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc02g081870.4.1	No alias	abscisic acid transporter (ABCG31). subfamily ABCG transporter	0.03	Archaeplastida
Solyc05g018510.3.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.04	Archaeplastida
Solyc06g065670.4.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.07	Archaeplastida
Solyc08g067620.2.1	No alias	subfamily ABCG transporter	0.1	Archaeplastida
Solyc09g091670.3.1	No alias	subfamily ABCG transporter	0.07	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Solyc12g019640.2.1	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Solyc12g098210.3.1	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Zm00001e006460_P001	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Zm00001e016714_P002	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e019932_P002	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e024257_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e026148_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e033859_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e035120_P001	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Zm00001e037233_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e040575_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	730	793
IPR029481	ABC_trans_N	96	153
IPR003439	ABC_transporter-like	860	1010
IPR013525	ABC_2_trans	513	725
IPR013525	ABC_2_trans	1156	1369
IPR003439	ABC_transporter-like	178	360

External Links

No external refs found!

Solyc12g100190.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation