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  5. Solyc12g100290.3.1

Solyc12g100290.3.1


Description : class II/ASH1 histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0000350 (Archaeplastida) Phylogenetic Tree(s): OG0000350_tree ,
OG_05_0002002 (LandPlants) Phylogenetic Tree(s): OG_05_0002002_tree ,
OG_06_0002098 (SeedPlants) Phylogenetic Tree(s): OG_06_0002098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g100290.3.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT3G59960 ASHH4, SDG24 histone-lysine N-methyltransferase ASHH4 0.03 Archaeplastida
AT4G30860 ASHR3, SDG4 SET domain group 4 0.03 Archaeplastida
Cpa|evm.model.tig00001073.18 No alias Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
Cre07.g322450 No alias Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
GSVIVT01023699001 No alias Chromatin organisation.histone modifications.histone... 0.05 Archaeplastida
LOC_Os02g34850.1 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
LOC_Os12g41900.1 No alias class III/Trithorax histone methyltransferase component... 0.04 Archaeplastida
Mp8g18560.1 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Pp3c24_20920V3.1 No alias SET domain protein 25 0.02 Archaeplastida
Pp3c4_29810V3.1 No alias SET domain group 4 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004529 exodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Neighborhood
MF GO:0008409 5'-3' exonuclease activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 124 229
No external refs found!