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Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0000646 (SeedPlants) Phylogenetic Tree(s): OG_06_0000646_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01000012001 | |
| Cluster | HCCA: Cluster_204 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00198780 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | Archaeplastida | |
| AMTR_s00015p00239460 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | Archaeplastida | |
| AT1G22490 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.07 | Archaeplastida | |
| Gb_21105 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os02g46560.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| LOC_Os04g50090.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os08g37730.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os09g29360.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Pp3c22_14220V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Solyc04g074810.4.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Solyc05g053660.3.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e009989_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e015903_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e023271_P001 | No alias | transcription factor (bHLH) | 0.06 | Archaeplastida | |
| Zm00001e034422_P002 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Neighborhood |
| MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0030247 | polysaccharide binding | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Neighborhood |
| MF | GO:0042277 | peptide binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0045185 | maintenance of protein location | IEP | Neighborhood |
| MF | GO:0046923 | ER retention sequence binding | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051235 | maintenance of location | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051651 | maintenance of location in cell | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 127 | 178 |
| No external refs found! |