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  5. GSVIVT01000102001

GSVIVT01000102001


Description : Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0000030 (SeedPlants) Phylogenetic Tree(s): OG_06_0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000102001
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241260 evm_27.TU.AmTr_v1... Germin-like protein 3-7 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
AMTR_s00045p00155350 evm_27.TU.AmTr_v1... Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
AMTR_s00089p00120230 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
AMTR_s00794p00001640 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01000061001 No alias No description available 0.01 Archaeplastida
LOC_Os01g18170.1 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os02g29000.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os03g48780.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g22080.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g08980.1 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
LOC_Os08g08990.1 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g09010.1 No alias Germin-like protein 8-7 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os12g05880.1 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.01 Archaeplastida
MA_10436609g0010 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.02 Archaeplastida
MA_43266g0010 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
MA_7641850g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_828526g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_90878g0010 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp2g01630.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp5g23430.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Mp5g23510.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.01 Archaeplastida
Smo103051 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica 0.1 Archaeplastida
Smo109968 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo228015 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
Smo229747 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
Solyc01g102380.5.1.1 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.01 Archaeplastida
Solyc03g113570.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.01 Archaeplastida
Solyc03g113580.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.01 Archaeplastida
Solyc09g090005.1.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g090040.3.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e006055_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e013714_P001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e014725_P001 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e021635_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e031079_P001 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e032256_P001 No alias Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e039955_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 65 213
No external refs found!