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  5. GSVIVT01000114001

GSVIVT01000114001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL26 component


Gene families : OG0002117 (Archaeplastida) Phylogenetic Tree(s): OG0002117_tree ,
OG_05_0002108 (LandPlants) Phylogenetic Tree(s): OG_05_0002108_tree ,
OG_06_0002767 (SeedPlants) Phylogenetic Tree(s): OG_06_0002767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000114001
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT3G49910 No alias Translation protein SH3-like family protein 0.03 Archaeplastida
AT5G67510 No alias Translation protein SH3-like family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000144.60 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
GSVIVT01000121001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Gb_06102 No alias component RPL26 of LSU proteome component 0.05 Archaeplastida
LOC_Os11g05370.1 No alias component RPL26 of LSU proteome component 0.04 Archaeplastida
LOC_Os12g05430.1 No alias component RPL26 of LSU proteome component 0.04 Archaeplastida
MA_13141g0010 No alias component RPL26 of LSU proteome component 0.02 Archaeplastida
MA_158811g0010 No alias component RPL26 of LSU proteome component 0.03 Archaeplastida
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.04 Archaeplastida
Pp3c14_25170V3.1 No alias Translation protein SH3-like family protein 0.06 Archaeplastida
Pp3c1_25000V3.1 No alias Translation protein SH3-like family protein 0.05 Archaeplastida
Pp3c4_17780V3.1 No alias Translation protein SH3-like family protein 0.03 Archaeplastida
Smo227399 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Solyc02g092430.1.1 No alias component RPL26 of LSU proteome component 0.07 Archaeplastida
Solyc03g044000.1.1 No alias component RPL26 of LSU proteome component 0.06 Archaeplastida
Zm00001e016957_P001 No alias component RPL26 of LSU proteome component 0.05 Archaeplastida
Zm00001e025774_P001 No alias component RPL26 of LSU proteome component 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR005824 KOW 51 82
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
No external refs found!