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  5. GSVIVT01000141001

GSVIVT01000141001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000141001
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00051070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
AT4G37540 LBD39 LOB domain-containing protein 39 0.02 Archaeplastida
AT5G67420 LBD37, ASL39 LOB domain-containing protein 37 0.04 Archaeplastida
Gb_36943 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os01g03890.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g32770.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os03g41330.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_70989g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_75731g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp3g12980.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Pp3c18_9980V3.1 No alias LOB domain-containing protein 37 0.03 Archaeplastida
Solyc02g085910.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g077990.3.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Zm00001e001981_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!